Genomic Data CommonsData Portal
Harmonized Cancer Datasets
A repository and computational platform for cancer researchers who need to understand cancer, its clinical progression, and response to therapy.
Data Portal Summary
...High-quality DatasetsFrom Foundational Cancer Genomic Studies
High-quality datasets spanning cases from cancer genomic studies such as The Cancer Genomic Atlas (TCGA), Human Cancer Models Initiative (HCMI), Foundation Medicine Inc. (FMI), and Clinical Proteomic Tumor Analysis Consortium (CPTAC).
Explore These Studies and More in the Projects App
Access Harmonized Clinical and Genomic Data
Access Harmonized Clinical and Genomic Data
Harmonized clinical and genomic data allow for convenient cross-analysis and comparison.
Clinical data, including demographics, diagnosis and treatment information, are standardized across hundreds of distinct properties.
State-of-the-art bioinformatics workflows are employed to align sequencing reads, ranging from whole genome to single-cell RNA, and generate high-level derived data.
Visualize Genomic Alterations and Clinical Features
Create and refine custom cohorts of cancer patients for in silico studies using a variety of clinical and biospecimen filters in the Cohort Builder.
- Survival Plot
- Mutation Frequency
- ProteinPaint
Analyze your custom cohorts by applying the GDC's collection of tools for visualizing clinical features, genomic alterations, and other cancer drivers.
Explore More ToolsDownload Primary and Higher-Level
Data For Further Analysis
Download Primary and Higher-Level
Data For Further Analysis
Seamlessly download clinical, biospecimen, and genomic data from your cohorts for further analysis.
Browse through the files associated with your cohorts in the Repository app.
Find the files you want with the filters available, whether you are looking for somatic variants, gene expression data, slide images, or even files generated from a specific workflow.
Have questionsabout the GDC's data or applications?
Contact our knowledgeable and highly engaged team of specialists for help with the data and the many features offered by the Genomic Data Commons. Send a question, suggestion, or description of an issue to our team who will respond promptly.
We look forward to hearing from our users!